Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
RPA3P35244 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC3.81□□□□□ -1.8
RPA3P35244 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.81□□□□□ -1.8
RPA3P35244 HYKK-203ENST00000563233 734 ntTSL 2 BASIC3.81□□□□□ -1.8
RPA3P35244 MIR4738-201ENST00000579134 87 ntBASIC3.81□□□□□ -1.8
RPA3P35244 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.81□□□□□ -1.8
RPA3P35244 AL034351.1-201ENST00000605288 668 ntBASIC3.81□□□□□ -1.8
RPA3P35244 AC017076.1-201ENST00000607613 578 ntBASIC3.81□□□□□ -1.8
RPA3P35244 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.81□□□□□ -1.8
RPA3P35244 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPA3P35244 AL645927.2-201ENST00000618350 349 ntBASIC3.81□□□□□ -1.8
RPA3P35244 AC145207.9-201ENST00000623802 325 ntBASIC3.81□□□□□ -1.8
RPA3P35244 MAPK10-372ENST00000641954 3413 ntBASIC3.81□□□□□ -1.8
RPA3P35244 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
RPA3P35244 AC007342.7-201ENST00000624610 2337 ntBASIC3.81□□□□□ -1.8
RPA3P35244 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPA3P35244 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
RPA3P35244 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RPA3P35244 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
RPA3P35244 RPS6KA6-204ENST00000620340 8169 ntTSL 5 BASIC3.8□□□□□ -1.8
RPA3P35244 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 MIR199A2-201ENST00000385289 110 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AC136624.1-201ENST00000400791 413 ntBASIC3.8□□□□□ -1.8
RPA3P35244 PPIAP31-201ENST00000405422 495 ntBASIC3.8□□□□□ -1.8
RPA3P35244 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.8□□□□□ -1.8
RPA3P35244 RN7SKP222-201ENST00000410651 315 ntBASIC3.8□□□□□ -1.8
RPA3P35244 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 AL391704.2-201ENST00000418379 981 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 IPMKP1-201ENST00000425988 855 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC3.8□□□□□ -1.8
RPA3P35244 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC3.8□□□□□ -1.8
RPA3P35244 CCRL1P1-201ENST00000449542 1053 ntBASIC3.8□□□□□ -1.8
RPA3P35244 NANOGP10-201ENST00000453325 895 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC3.8□□□□□ -1.8
RPA3P35244 AC010460.1-201ENST00000507087 466 ntBASIC3.8□□□□□ -1.8
RPA3P35244 RAC1P2-201ENST00000511164 579 ntBASIC3.8□□□□□ -1.8
RPA3P35244 NDUFB4P12-201ENST00000513465 390 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC3.8□□□□□ -1.8
RPA3P35244 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC3.8□□□□□ -1.8
RPA3P35244 AC079203.2-201ENST00000559867 387 ntTSL 2 BASIC3.8□□□□□ -1.8
RPA3P35244 MIR4286-201ENST00000580651 93 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC3.8□□□□□ -1.8
RPA3P35244 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 AC005255.1-201ENST00000593748 216 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.8□□□□□ -1.8
RPA3P35244 AC067959.1-201ENST00000604334 379 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC3.8□□□□□ -1.8
RPA3P35244 MIR6875-201ENST00000617506 72 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AC079684.1-201ENST00000621405 437 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AP006248.2-201ENST00000623309 592 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AC073530.2-201ENST00000623987 261 ntBASIC3.8□□□□□ -1.8
RPA3P35244 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC3.8□□□□□ -1.8
RPA3P35244 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
RPA3P35244 AC009229.4-201ENST00000623854 1947 ntBASIC3.8□□□□□ -1.8
RPA3P35244 CEP170P1-201ENST00000502249 4587 ntBASIC3.79□□□□□ -1.8
RPA3P35244 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPA3P35244 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC3.79□□□□□ -1.8
RPA3P35244 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC3.79□□□□□ -1.8
RPA3P35244 THOC1-221ENST00000631280 2011 ntTSL 5 BASIC3.79□□□□□ -1.8
RPA3P35244 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
RPA3P35244 RNU6-304P-201ENST00000364855 107 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AC048351.1-201ENST00000420064 602 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AC092013.1-201ENST00000438795 332 ntBASIC3.79□□□□□ -1.8
RPA3P35244 SNORA71B-202ENST00000439232 272 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC3.79□□□□□ -1.8
RPA3P35244 AC087071.2-201ENST00000483283 575 ntTSL 4 BASIC3.79□□□□□ -1.8
RPA3P35244 AC108941.1-201ENST00000502853 530 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AC010451.3-201ENST00000511721 444 ntTSL 3 BASIC3.79□□□□□ -1.8
RPA3P35244 AC120193.1-201ENST00000518988 741 ntTSL 2 BASIC3.79□□□□□ -1.8
RPA3P35244 OR5AP1P-201ENST00000529730 940 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AP001360.2-201ENST00000534423 562 ntTSL 4 BASIC3.79□□□□□ -1.8
RPA3P35244 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
RPA3P35244 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPA3P35244 NPM1P47-201ENST00000560843 856 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC3.79□□□□□ -1.8
RPA3P35244 SS18L2P2-201ENST00000583960 235 ntBASIC3.79□□□□□ -1.8
RPA3P35244 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.79□□□□□ -1.8
RPA3P35244 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.79□□□□□ -1.8
RPA3P35244 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.79□□□□□ -1.8
RPA3P35244 PHKBP1-201ENST00000450951 1951 ntBASIC3.79□□□□□ -1.8
RPA3P35244 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPA3P35244 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.79□□□□□ -1.8
RPA3P35244 AC021086.1-201ENST00000499025 1569 ntTSL 3 BASIC3.79□□□□□ -1.8
RPA3P35244 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.79□□□□□ -1.8
RPA3P35244 TNPO1P3-201ENST00000436471 2662 ntBASIC3.78□□□□□ -1.8
RPA3P35244 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC3.78□□□□□ -1.8
RPA3P35244 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 MYOZ2-201ENST00000307128 2597 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.78□□□□□ -1.8
RPA3P35244 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.78□□□□□ -1.8
RPA3P35244 MIR92A2-201ENST00000385299 75 ntBASIC3.78□□□□□ -1.8
RPA3P35244 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
RPA3P35244 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.78□□□□□ -1.8
RPA3P35244 HIGD1AP12-201ENST00000427832 281 ntBASIC3.78□□□□□ -1.8
RPA3P35244 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC3.78□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms