Protein–RNA interactions for Protein: P29400

COL4A5, Collagen alpha-5(IV) chain, humanhuman

Predictions only

Length 1,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5P29400 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A5P29400 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A5P29400 ANKRD36P1-201ENST00000344424 659 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC4.22□□□□□ -1.73
COL4A5P29400 CCRL1P1-201ENST00000449542 1053 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.22□□□□□ -1.73
COL4A5P29400 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
COL4A5P29400 UBTFL9-201ENST00000534504 1148 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 AC027281.1-201ENST00000574178 758 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 LARP7P3-201ENST00000579888 337 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 Xist_exon4.1-201ENST00000615964 126 ntBASIC4.22□□□□□ -1.73
COL4A5P29400 PEX5L-202ENST00000392649 8540 ntAPPRIS ALT2 TSL 5 BASIC4.22□□□□□ -1.73
COL4A5P29400 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
COL4A5P29400 TIPARP-207ENST00000542783 3681 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
COL4A5P29400 CPD-202ENST00000543464 4007 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A5P29400 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A5P29400 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
COL4A5P29400 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A5P29400 ERMN-204ENST00000409925 556 ntTSL 4 BASIC4.21□□□□□ -1.74
COL4A5P29400 RNA5SP306-201ENST00000411087 107 ntBASIC4.21□□□□□ -1.74
COL4A5P29400 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A5P29400 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A5P29400 LINC02383-201ENST00000508563 582 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A5P29400 AC084116.3-201ENST00000519123 429 ntTSL 3 BASIC4.21□□□□□ -1.74
COL4A5P29400 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC4.21□□□□□ -1.74
COL4A5P29400 AL163642.2-201ENST00000604722 1019 ntBASIC4.21□□□□□ -1.74
COL4A5P29400 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A5P29400 AC083843.3-201ENST00000623679 2186 ntBASIC4.21□□□□□ -1.74
COL4A5P29400 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A5P29400 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A5P29400 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A5P29400 CEP57L1-216ENST00000521522 2259 ntTSL 5 BASIC4.21□□□□□ -1.74
COL4A5P29400 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.21□□□□□ -1.74
COL4A5P29400 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
COL4A5P29400 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 OR2H1-202ENST00000377133 3021 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
COL4A5P29400 KNTC1-204ENST00000436959 2412 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A5P29400 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC4.2□□□□□ -1.74
COL4A5P29400 U3.19-201ENST00000390893 196 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 RN7SKP111-201ENST00000410349 271 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 AC008065.1-201ENST00000428525 348 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 AC062032.1-201ENST00000436245 355 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A5P29400 NANOGNBP1-201ENST00000448444 480 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 AC097262.1-201ENST00000452559 548 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC4.2□□□□□ -1.74
COL4A5P29400 ATP5A1P2-202ENST00000616464 443 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A5P29400 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.2□□□□□ -1.74
COL4A5P29400 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A5P29400 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC4.2□□□□□ -1.74
COL4A5P29400 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC4.2□□□□□ -1.74
COL4A5P29400 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 MBD5-212ENST00000627651 5610 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A5P29400 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 LINC02477-201ENST00000512652 1417 ntTSL 5 BASIC4.2□□□□□ -1.74
COL4A5P29400 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.2□□□□□ -1.74
COL4A5P29400 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A5P29400 AC097504.1-201ENST00000515103 2415 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 SNORA44-201ENST00000384584 132 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 ZDHHC20P2-201ENST00000424108 429 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 OR5AW1P-201ENST00000426334 1006 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 ATP6V0E1P4-201ENST00000427294 242 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A5P29400 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A5P29400 RPL7P38-201ENST00000488396 739 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 RPL5P23-201ENST00000496040 868 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 HMGB3P13-201ENST00000511263 607 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AC023141.12-201ENST00000512399 199 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A5P29400 KIRREL3-AS2-201ENST00000532988 492 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 AL121603.1-201ENST00000553815 142 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 ACTR3BP1-201ENST00000605584 1247 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AP003355.3-201ENST00000623465 114 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A5P29400 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A5P29400 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
COL4A5P29400 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
COL4A5P29400 FIGNL1-212ENST00000613602 3187 ntAPPRIS P1 TSL 5 BASIC4.19□□□□□ -1.74
COL4A5P29400 CROT-204ENST00000442291 1993 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A5P29400 TAF9BP1-201ENST00000396646 746 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 HLFP1-201ENST00000402375 499 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 MTHFD2P2-201ENST00000407725 247 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AC093698.1-201ENST00000423843 571 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 RPL12P46-201ENST00000436610 195 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AC009365.2-201ENST00000453078 799 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A5P29400 PDCD10-207ENST00000471885 764 ntTSL 5 BASIC4.19□□□□□ -1.74
COL4A5P29400 AC004069.2-201ENST00000505438 1114 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 AC109458.1-201ENST00000508858 316 ntBASIC4.19□□□□□ -1.74
COL4A5P29400 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.19□□□□□ -1.74
COL4A5P29400 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC4.19□□□□□ -1.74
COL4A5P29400 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC4.19□□□□□ -1.74
COL4A5P29400 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC4.19□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms