Protein–RNA interactions for Protein: P11532

DMD, Dystrophin, humanhuman

Predictions only

Length 3,685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DMDP11532 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DMDP11532 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DMDP11532 LBR-202ENST00000338179 3812 ntAPPRIS P1 TSL 5 BASIC3.33□□□□□ -1.88
DMDP11532 PTP4A1-205ENST00000626021 2203 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
DMDP11532 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC3.33□□□□□ -1.88
DMDP11532 AL358178.1-201ENST00000407698 397 ntBASIC3.33□□□□□ -1.88
DMDP11532 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC3.33□□□□□ -1.88
DMDP11532 HMGB1P18-201ENST00000438801 619 ntBASIC3.33□□□□□ -1.88
DMDP11532 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC3.33□□□□□ -1.88
DMDP11532 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC3.33□□□□□ -1.88
DMDP11532 AC241585.2-209ENST00000638217 143 ntBASIC3.33□□□□□ -1.88
DMDP11532 Z95327.2-201ENST00000414579 1873 ntBASIC3.33□□□□□ -1.88
DMDP11532 MAS1-201ENST00000252660 9841 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DMDP11532 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC3.32□□□□□ -1.88
DMDP11532 SNORA67.4-201ENST00000384688 142 ntBASIC3.32□□□□□ -1.88
DMDP11532 RN7SKP111-201ENST00000410349 271 ntBASIC3.32□□□□□ -1.88
DMDP11532 AL139281.1-201ENST00000422120 335 ntBASIC3.32□□□□□ -1.88
DMDP11532 MYL8P-204ENST00000431574 518 ntBASIC3.32□□□□□ -1.88
DMDP11532 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC3.32□□□□□ -1.88
DMDP11532 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.32□□□□□ -1.88
DMDP11532 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.32□□□□□ -1.88
DMDP11532 CYCSP39-201ENST00000565821 309 ntBASIC3.32□□□□□ -1.88
DMDP11532 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 LINC01378-201ENST00000422145 2516 ntTSL 3 BASIC3.32□□□□□ -1.88
DMDP11532 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DMDP11532 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.32□□□□□ -1.88
DMDP11532 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 RBM23-203ENST00000359890 10040 ntAPPRIS P4 TSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC3.32□□□□□ -1.88
DMDP11532 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 RNA5SP187-201ENST00000384400 119 ntBASIC3.32□□□□□ -1.88
DMDP11532 NPM1P11-201ENST00000417106 855 ntBASIC3.32□□□□□ -1.88
DMDP11532 SETP12-201ENST00000514068 805 ntBASIC3.32□□□□□ -1.88
DMDP11532 ATP5F1P5-201ENST00000526403 760 ntBASIC3.32□□□□□ -1.88
DMDP11532 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC3.32□□□□□ -1.88
DMDP11532 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 AC068647.1-201ENST00000489539 2265 ntBASIC3.32□□□□□ -1.88
DMDP11532 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 RNA5SP197-201ENST00000363357 119 ntBASIC3.32□□□□□ -1.88
DMDP11532 RSL24D1P1-201ENST00000404972 493 ntBASIC3.32□□□□□ -1.88
DMDP11532 AC006480.1-201ENST00000449887 378 ntBASIC3.32□□□□□ -1.88
DMDP11532 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.32□□□□□ -1.88
DMDP11532 MIR2682-201ENST00000580305 110 ntBASIC3.32□□□□□ -1.88
DMDP11532 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.32□□□□□ -1.88
DMDP11532 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 CHRM3-AS2-209ENST00000628573 766 ntTSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
DMDP11532 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC3.32□□□□□ -1.88
DMDP11532 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
DMDP11532 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC3.31□□□□□ -1.88
DMDP11532 RPL31P50-201ENST00000471002 296 ntBASIC3.31□□□□□ -1.88
DMDP11532 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.31□□□□□ -1.88
DMDP11532 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC3.31□□□□□ -1.88
DMDP11532 H3F3AP1-201ENST00000559984 334 ntBASIC3.31□□□□□ -1.88
DMDP11532 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 AC010168.2-201ENST00000562691 5428 ntBASIC3.31□□□□□ -1.88
DMDP11532 RSF1-201ENST00000308488 11550 ntAPPRIS P2 TSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 SORT1-209ENST00000538502 6993 ntTSL 2 BASIC3.31□□□□□ -1.88
DMDP11532 AC026353.1-201ENST00000470523 558 ntTSL 2 BASIC3.31□□□□□ -1.88
DMDP11532 RNA5SP356-201ENST00000515972 94 ntBASIC3.31□□□□□ -1.88
DMDP11532 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.31□□□□□ -1.88
DMDP11532 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC3.31□□□□□ -1.88
DMDP11532 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC3.31□□□□□ -1.88
DMDP11532 TPTE2P3-201ENST00000441562 1189 ntBASIC3.31□□□□□ -1.88
DMDP11532 FAM172BP-201ENST00000487497 1089 ntBASIC3.31□□□□□ -1.88
DMDP11532 AC100770.1-201ENST00000532310 322 ntBASIC3.31□□□□□ -1.88
DMDP11532 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
DMDP11532 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.3□□□□□ -1.88
DMDP11532 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC3.3□□□□□ -1.88
DMDP11532 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
DMDP11532 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC3.3□□□□□ -1.88
DMDP11532 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.3□□□□□ -1.88
DMDP11532 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.3□□□□□ -1.88
DMDP11532 HSD52-202ENST00000436225 772 ntTSL 3 BASIC3.3□□□□□ -1.88
DMDP11532 AC090602.1-201ENST00000469695 252 ntBASIC3.3□□□□□ -1.88
DMDP11532 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.3□□□□□ -1.88
DMDP11532 TRAV15-201ENST00000556680 249 ntBASIC3.3□□□□□ -1.88
DMDP11532 AC090877.1-201ENST00000561418 344 ntBASIC3.3□□□□□ -1.88
DMDP11532 MBNL3-204ENST00000370853 2661 ntAPPRIS P4 TSL 1 (best) BASIC3.3□□□□□ -1.88
DMDP11532 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
DMDP11532 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.3□□□□□ -1.88
DMDP11532 PSD3-220ENST00000615573 5843 ntTSL 5 BASIC3.3□□□□□ -1.88
DMDP11532 DNHD1-212ENST00000527990 14298 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
DMDP11532 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC3.3□□□□□ -1.88
DMDP11532 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
DMDP11532 PREPL-216ENST00000541738 6049 ntTSL 2 BASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 93.6 ms