Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 RN7SKP83-201ENST00000516512 178 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LINC02416-201ENST00000550019 540 ntTSL 4 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC006116.5-201ENST00000591936 559 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC123786.2-201ENST00000603459 275 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL390816.3-201ENST00000604527 1066 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 Z82195.1-201ENST00000604558 398 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC242628.1-201ENST00000606810 391 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AC100814.1-201ENST00000606963 623 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL355802.4-201ENST00000607635 548 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 AL139089.1-201ENST00000620372 975 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LGI1-209ENST00000627699 664 ntTSL 3 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 ATE1-AS1-202ENST00000636460 506 ntBASIC3.5□□□□□ -1.85
HLA-DPB1P04440 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 LINC01094-203ENST00000504675 1985 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 NUFIP2-201ENST00000225388 10850 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 FER-201ENST00000281092 12119 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HLA-DPB1P04440 DDX18P3-201ENST00000404856 2007 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 CFHR3-205ENST00000471440 1965 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC011155.1-201ENST00000316512 456 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 RN7SKP33-201ENST00000410942 340 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 EIF4A1P3-201ENST00000411521 244 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC108032.1-201ENST00000416706 207 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC127526.1-201ENST00000417526 366 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 HIGD1AP4-201ENST00000430194 280 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AL031123.1-201ENST00000432823 568 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 GPC6-AS1-201ENST00000436329 698 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 XKRY2-201ENST00000442362 1093 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC023512.1-201ENST00000444513 499 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 TPRKBP1-201ENST00000456243 481 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 RNU6-1218P-201ENST00000458990 108 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 HESX1-202ENST00000473921 757 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC106872.2-201ENST00000494303 480 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 RN7SKP209-201ENST00000516888 304 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 SUMO2P20-201ENST00000520803 283 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 NPM1P6-201ENST00000521088 871 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC026616.1-201ENST00000523157 525 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 NOP56P3-201ENST00000549457 385 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AF123462.1-201ENST00000554307 446 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC025884.1-201ENST00000556034 378 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC090877.1-201ENST00000561418 344 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 ZNF562-205ENST00000587392 583 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC244505.7-201ENST00000599675 272 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AL590392.1-201ENST00000604960 446 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC009704.2-201ENST00000618739 483 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC245452.5-201ENST00000620649 780 ntTSL 3 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AC010608.2-201ENST00000624830 470 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 RNF38-203ENST00000353739 4945 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HLA-DPB1P04440 AP000756.2-201ENST00000624168 2567 ntBASIC3.49□□□□□ -1.85
HLA-DPB1P04440 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 EED-206ENST00000527888 1422 ntTSL 2 BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 RNU6-304P-201ENST00000364855 107 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 AC068538.1-201ENST00000376856 336 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 MIR92A2-201ENST00000385299 75 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 RPS26P8-201ENST00000393490 348 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 MTND3P20-201ENST00000407663 186 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 HSPE1P12-201ENST00000412576 301 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC3.48□□□□□ -1.85
HLA-DPB1P04440 AC073136.2-201ENST00000417282 849 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 OR5BE1P-201ENST00000425977 939 ntBASIC3.48□□□□□ -1.85
HLA-DPB1P04440 MRPL50P1-201ENST00000431951 384 ntBASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms