Protein–RNA interactions for Protein: A0A0J9YWV2

TRBV4-1, T-cell receptor beta variable 4-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV4-1A0A0J9YWV2 AC138393.1-206ENST00000540997 1886 ntBASIC3.96□□□□□ -1.78
TRBV4-1A0A0J9YWV2 NOL8P1-201ENST00000508336 3529 ntBASIC3.96□□□□□ -1.78
TRBV4-1A0A0J9YWV2 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRBV4-1A0A0J9YWV2 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
TRBV4-1A0A0J9YWV2 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.96□□□□□ -1.78
TRBV4-1A0A0J9YWV2 CR788268.1-201ENST00000603931 1809 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 FAM111A-201ENST00000361723 3592 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC025263.3-201ENST00000622965 1396 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 CUL2-201ENST00000374746 3903 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC008033.1-201ENST00000216407 1162 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RNU1-87P-201ENST00000363727 170 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RNU4-51P-201ENST00000364206 140 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 MIR3065-201ENST00000390137 79 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 EEF1E1-BLOC1S5-201ENST00000397456 768 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL449283.1-202ENST00000418249 604 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RPL7AP25-201ENST00000423357 805 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 USP12PY-201ENST00000427677 1064 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RPL7P4-203ENST00000430239 730 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RPL21P110-201ENST00000433345 446 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC105940.1-201ENST00000434265 353 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 OR10R1P-201ENST00000441524 1141 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 MTCYBP42-201ENST00000444653 1130 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ITGA9-AS1-207ENST00000445429 532 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 BBIP1-206ENST00000447005 727 ntAPPRIS P1 TSL 2 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC026348.1-201ENST00000462549 1053 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 XACT-201ENST00000468762 497 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RN7SL585P-201ENST00000470538 280 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC104689.1-201ENST00000473356 768 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC015724.1-201ENST00000478577 156 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RN7SL812P-201ENST00000493791 279 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 MRPS33-209ENST00000496958 688 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC025445.1-201ENST00000502728 300 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AP000676.2-201ENST00000529711 301 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 BRD9P1-201ENST00000529855 560 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 DEFB130C-202ENST00000530001 230 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 LINC02423-202ENST00000542577 460 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 DNAL1-205ENST00000554339 548 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL133279.2-201ENST00000556546 428 ntTSL 3 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC110743.1-201ENST00000584870 478 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC079587.1-201ENST00000603846 277 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC002487.1-201ENST00000604565 994 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL157392.4-201ENST00000609756 345 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC064801.1-201ENST00000612025 407 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC123767.1-202ENST00000620407 817 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC018445.2-201ENST00000622987 260 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC008785.1-201ENST00000624475 456 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AP003072.4-201ENST00000624580 310 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 A2MP1-204ENST00000566278 4130 ntBASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRBV4-1A0A0J9YWV2 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 GBE1-205ENST00000489715 2513 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 STARD4-201ENST00000296632 4606 ntAPPRIS P1 TSL 2 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ZNF29P-201ENST00000225587 168 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 PLET1-201ENST00000338832 1215 ntAPPRIS P1 TSL 5 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 SNORA51.12-201ENST00000384448 134 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL645733.1-201ENST00000402250 217 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 TRAPPC2P10-201ENST00000415662 323 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 MTCO2P17-201ENST00000424336 677 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 C1DP1-201ENST00000426049 402 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC234064.1-201ENST00000436312 247 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ELOCP8-201ENST00000439309 332 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ELOCP15-201ENST00000442090 332 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RPL7P61-201ENST00000451721 751 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 DHFRP3-201ENST00000455595 559 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 C1orf143-202ENST00000491260 813 ntTSL 3 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 RPL21P131-201ENST00000497298 483 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 NDUFB5P1-201ENST00000508134 564 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 AC017037.1-201ENST00000508460 471 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 PGBD4P4-201ENST00000509673 613 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 ATG10-208ENST00000513634 618 ntTSL 2 BASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 snoZ278.1-201ENST00000517059 112 ntBASIC3.94□□□□□ -1.78
TRBV4-1A0A0J9YWV2 IGLVVI-25-1-201ENST00000521893 249 ntBASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 94.5 ms