Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PCDHA1-201ENST00000378133 2726 ntBASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 CLEC3B-201ENST00000296130 936 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 CHST11-203ENST00000547956 936 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 WTAP-207ENST00000631126 1430 ntTSL 3 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 AL161938.1-201ENST00000569833 2180 ntBASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC10.05□□□□□ -0.8
LINC01558Q9Y6Z2 AL136379.1-201ENST00000623471 2642 ntBASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 AC022211.2-201ENST00000585075 2527 ntBASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 AC004687.1-201ENST00000579003 1625 ntBASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 AC011484.1-201ENST00000377652 1995 ntBASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 AC108860.2-201ENST00000562760 2183 ntBASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.04□□□□□ -0.8
LINC01558Q9Y6Z2 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC10.03□□□□□ -0.8
LINC01558Q9Y6Z2 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC10.03□□□□□ -0.8
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms