Protein–RNA interactions for Protein: Q9Y5R8

TRAPPC1, Trafficking protein particle complex subunit 1, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1Q9Y5R8 MADD-208ENST00000405573 1823 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 PCDHA12-202ENST00000613593 2588 ntBASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 DUX4L18-201ENST00000553347 1267 ntBASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 PTPRA-205ENST00000399903 3337 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 POMT1-208ENST00000423007 3320 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAPPC1Q9Y5R8 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 AC006455.2-201ENST00000429931 906 ntBASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 PVT1_1.1-201ENST00000615125 194 ntBASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 AC074183.2-201ENST00000623112 922 ntBASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAPPC1Q9Y5R8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 AC010525.1-201ENST00000585559 441 ntBASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
TRAPPC1Q9Y5R8 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
TRAPPC1Q9Y5R8 FP475955.4-201ENST00000623131 1990 ntBASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 18 ms