Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
UBE2D4Q9Y2X8 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 AC093525.10-201ENST00000625130 1569 ntBASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 Z98044.1-201ENST00000632503 1764 ntBASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 AC135050.7-201ENST00000624508 2218 ntBASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 BET1L-204ENST00000410108 637 ntTSL 3 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 AC008694.1-202ENST00000636953 945 ntBASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 USP39-202ENST00000409025 1946 ntTSL 5 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
UBE2D4Q9Y2X8 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 AC090164.3-201ENST00000610780 2143 ntBASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 AL390961.4-201ENST00000623958 2535 ntBASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 WIZP1-201ENST00000531444 2299 ntBASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
UBE2D4Q9Y2X8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 CALM3-202ENST00000391918 702 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 CYP2T1P-201ENST00000432607 1285 ntBASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
UBE2D4Q9Y2X8 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
UBE2D4Q9Y2X8 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC13.44□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms