Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 AL032819.2-201ENST00000624543 2162 ntBASIC22.14■■□□□ 1.13
PCDHA4Q9UN74 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 Z85996.1-201ENST00000494644 937 ntBASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 AC131212.4-201ENST00000623606 975 ntBASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 AL049637.2-201ENST00000641778 930 ntBASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
PCDHA4Q9UN74 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 FAM197Y1-201ENST00000421178 764 ntBASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 CD177P1-201ENST00000606252 935 ntBASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 AC113410.3-201ENST00000623366 203 ntBASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 ABBA01031674.1-201ENST00000635145 728 ntBASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
PCDHA4Q9UN74 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 MDFI-202ENST00000373050 809 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 PTPA-216ENST00000432651 857 ntTSL 2 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 GRAP-204ENST00000573099 846 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 AP001412.1-201ENST00000608405 714 ntBASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
PCDHA4Q9UN74 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 SRI-203ENST00000419179 1307 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 MIR718-201ENST00000390190 70 ntBASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
PCDHA4Q9UN74 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.09■■□□□ 1.13
PCDHA4Q9UN74 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms