Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
SALL4Q9UJQ4 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 AL031598.1-201ENST00000561511 1773 ntBASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 MFF-205ENST00000354503 1085 ntTSL 2 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 FAM201B-201ENST00000458407 597 ntBASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 AC098934.4-201ENST00000564127 592 ntBASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 TBCB-214ENST00000629269 413 ntTSL 5 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SALL4Q9UJQ4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 AC092118.2-201ENST00000613495 667 ntBASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC20.54■□□□□ 0.88
SALL4Q9UJQ4 AC120498.9-201ENST00000339021 3867 ntBASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 NME6-213ENST00000451657 871 ntTSL 2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 MIR4651-201ENST00000582622 73 ntBASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 AC006557.6-201ENST00000623071 864 ntBASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.53■□□□□ 0.88
SALL4Q9UJQ4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SALL4Q9UJQ4 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SALL4Q9UJQ4 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SALL4Q9UJQ4 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.87
SALL4Q9UJQ4 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SALL4Q9UJQ4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.51■□□□□ 0.87
SALL4Q9UJQ4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SALL4Q9UJQ4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SALL4Q9UJQ4 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.51■□□□□ 0.87
SALL4Q9UJQ4 WIZP1-201ENST00000531444 2299 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 66.8 ms