Protein–RNA interactions for Protein: Q9UBD9

CLCF1, Cardiotrophin-like cytokine factor 1, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1Q9UBD9 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.21■□□□□ 0.35
CLCF1Q9UBD9 KRT8P41-201ENST00000533985 1514 ntBASIC17.21■□□□□ 0.34
CLCF1Q9UBD9 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
CLCF1Q9UBD9 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 EGLN1P1-201ENST00000531623 762 ntBASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 AC005363.2-201ENST00000618631 242 ntBASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
CLCF1Q9UBD9 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 AC112907.3-201ENST00000577781 2400 ntBASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 AC113347.1-201ENST00000413321 391 ntBASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
CLCF1Q9UBD9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 SLC25A3P1-201ENST00000443844 931 ntBASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.18■□□□□ 0.34
CLCF1Q9UBD9 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms