Protein–RNA interactions for Protein: Q9NTX5

ECHDC1, Ethylmalonyl-CoA decarboxylase, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1Q9NTX5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 PPP1R14BP5-201ENST00000440334 435 ntBASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC23.6■■□□□ 1.37
ECHDC1Q9NTX5 KRT16P1-201ENST00000399124 1418 ntBASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 Z85996.1-201ENST00000494644 937 ntBASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 CR392000.1-201ENST00000624770 1228 ntBASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC23.59■■□□□ 1.37
ECHDC1Q9NTX5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 AC131212.4-201ENST00000623606 975 ntBASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 AP006294.2-201ENST00000641667 209 ntBASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.58■■□□□ 1.37
ECHDC1Q9NTX5 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.58■■□□□ 1.36
ECHDC1Q9NTX5 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 FAM197Y1-201ENST00000421178 764 ntBASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 AC113410.3-201ENST00000623366 203 ntBASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 AL049637.2-201ENST00000641778 930 ntBASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC23.57■■□□□ 1.36
ECHDC1Q9NTX5 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 MDFI-202ENST00000373050 809 ntTSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 GRAP-204ENST00000573099 846 ntTSL 3 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 CD177P1-201ENST00000606252 935 ntBASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC23.56■■□□□ 1.36
ECHDC1Q9NTX5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 KRT8P41-201ENST00000533985 1514 ntBASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC23.55■■□□□ 1.36
ECHDC1Q9NTX5 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC23.55■■□□□ 1.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms