Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 AC008403.3-201ENST00000598924 454 ntBASIC17.95■□□□□ 0.46
POLE3Q9NRF9 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC17.95■□□□□ 0.46
POLE3Q9NRF9 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 KRT17P3-201ENST00000420566 1262 ntBASIC17.94■□□□□ 0.46
POLE3Q9NRF9 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 AC026366.1-201ENST00000488803 879 ntBASIC17.94■□□□□ 0.46
POLE3Q9NRF9 RNA5SP413-201ENST00000516373 109 ntBASIC17.94■□□□□ 0.46
POLE3Q9NRF9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
POLE3Q9NRF9 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 AC018445.3-201ENST00000624177 1945 ntBASIC17.93■□□□□ 0.46
POLE3Q9NRF9 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
POLE3Q9NRF9 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
POLE3Q9NRF9 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms