Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
HINT3Q9NQE9 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.46■□□□□ 0.39
HINT3Q9NQE9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
HINT3Q9NQE9 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ZNF815P-204ENST00000434898 1737 ntBASIC17.45■□□□□ 0.38
HINT3Q9NQE9 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 AC097658.1-201ENST00000475555 843 ntBASIC17.45■□□□□ 0.38
HINT3Q9NQE9 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
HINT3Q9NQE9 ADK-206ENST00000541550 2222 ntTSL 2 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 DUSP5P2-201ENST00000426873 1033 ntBASIC17.44■□□□□ 0.38
HINT3Q9NQE9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 AIRN-201ENST00000601203 4374 ntBASIC17.44■□□□□ 0.38
HINT3Q9NQE9 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
HINT3Q9NQE9 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
HINT3Q9NQE9 OR2A1-AS1-201ENST00000462305 773 ntBASIC17.43■□□□□ 0.38
HINT3Q9NQE9 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms