Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CSNK1G1Q9HCP0 CYP2D8P-201ENST00000433633 1490 ntBASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 Z82202.1-201ENST00000623446 1880 ntBASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 CRYGFP-201ENST00000418459 633 ntBASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 SLC25A1P4-201ENST00000567977 778 ntBASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 AC010947.1-201ENST00000623454 693 ntBASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.25■□□□□ 0.83
CSNK1G1Q9HCP0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 MFAP1P1-201ENST00000442257 1255 ntBASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 CKBP1-201ENST00000565489 1086 ntBASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 KRT8P11-201ENST00000409686 1436 ntBASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 GFI1-203ENST00000427103 2693 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CSNK1G1Q9HCP0 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 PRSS44-201ENST00000515154 1146 ntBASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 AC133561.5-201ENST00000635547 218 ntBASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CSNK1G1Q9HCP0 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 TSPY21P-201ENST00000433481 731 ntBASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 LINC01023-201ENST00000606054 436 ntBASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.22■□□□□ 0.83
CSNK1G1Q9HCP0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms