Protein–RNA interactions for Protein: Q9H0F5

RNF38, E3 ubiquitin-protein ligase RNF38, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38Q9H0F5 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.07■□□□□ 0.8
RNF38Q9H0F5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 FAM87A-204ENST00000613235 858 ntBASIC20.06■□□□□ 0.8
RNF38Q9H0F5 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
RNF38Q9H0F5 PCDHAC2-203ENST00000615316 3011 ntBASIC20.05■□□□□ 0.8
RNF38Q9H0F5 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
RNF38Q9H0F5 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 AC128688.1-201ENST00000487626 519 ntBASIC20.04■□□□□ 0.8
RNF38Q9H0F5 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 RBM42-202ENST00000586618 771 ntTSL 3 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.04■□□□□ 0.8
RNF38Q9H0F5 AC104417.2-201ENST00000562989 1793 ntBASIC20.03■□□□□ 0.8
RNF38Q9H0F5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 AC104076.2-201ENST00000448912 469 ntBASIC20.03■□□□□ 0.8
RNF38Q9H0F5 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
RNF38Q9H0F5 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms