Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CCM2Q9BSQ5 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 CR392000.1-201ENST00000624770 1228 ntBASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CCM2Q9BSQ5 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 KRT16P1-201ENST00000399124 1418 ntBASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 AL160286.2-201ENST00000567150 934 ntBASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 AC131212.4-201ENST00000623606 975 ntBASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 AC104417.2-201ENST00000562989 1793 ntBASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC19.03■□□□□ 0.64
CCM2Q9BSQ5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 TP73-202ENST00000354437 2140 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CCM2Q9BSQ5 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 LINC01465-201ENST00000408887 1940 ntBASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.02■□□□□ 0.63
CCM2Q9BSQ5 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 FAM197Y1-201ENST00000421178 764 ntBASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 CD177P1-201ENST00000606252 935 ntBASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 AC113410.3-201ENST00000623366 203 ntBASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CCM2Q9BSQ5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 18.1 ms