Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
LITAFQ99732 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LITAFQ99732 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 TMEM134-202ENST00000393877 823 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 AC079140.4-201ENST00000507448 529 ntBASIC12.88□□□□□ -0.35
LITAFQ99732 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC12.88□□□□□ -0.35
LITAFQ99732 GRAMD4P7-201ENST00000578182 1232 ntBASIC12.88□□□□□ -0.35
LITAFQ99732 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC12.88□□□□□ -0.35
LITAFQ99732 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC12.88□□□□□ -0.35
LITAFQ99732 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC12.88□□□□□ -0.35
LITAFQ99732 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LITAFQ99732 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC12.88□□□□□ -0.35
LITAFQ99732 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
LITAFQ99732 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
LITAFQ99732 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
LITAFQ99732 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 MIR572-201ENST00000384983 95 ntBASIC12.87□□□□□ -0.35
LITAFQ99732 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC12.87□□□□□ -0.35
LITAFQ99732 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 MPST-208ENST00000628507 698 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC12.87□□□□□ -0.35
LITAFQ99732 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 ZNF815P-204ENST00000434898 1737 ntBASIC12.87□□□□□ -0.35
LITAFQ99732 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
LITAFQ99732 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC12.87□□□□□ -0.35
LITAFQ99732 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 MPST-204ENST00000404393 1329 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC12.87□□□□□ -0.35
LITAFQ99732 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC12.87□□□□□ -0.35
LITAFQ99732 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 AC124067.4-201ENST00000519691 2379 ntBASIC12.86□□□□□ -0.35
LITAFQ99732 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
LITAFQ99732 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC12.86□□□□□ -0.35
LITAFQ99732 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC12.86□□□□□ -0.35
LITAFQ99732 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
LITAFQ99732 PCDHA12-202ENST00000613593 2588 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 15.7 ms