Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 KRT18P14-201ENST00000534205 1250 ntBASIC15.69■□□□□ 0.1
RAB40CQ96S21 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 MFSD11-216ENST00000590393 1141 ntBASIC15.69■□□□□ 0.1
RAB40CQ96S21 TFG-210ENST00000620299 1289 ntTSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
RAB40CQ96S21 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
RAB40CQ96S21 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
RAB40CQ96S21 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
RAB40CQ96S21 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 MPC1-202ENST00000360961 962 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 MCRIP2P1-201ENST00000394346 511 ntBASIC15.67■□□□□ 0.1
RAB40CQ96S21 KRT19P1-201ENST00000405746 1186 ntBASIC15.67■□□□□ 0.1
RAB40CQ96S21 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 AC100791.3-201ENST00000617619 330 ntBASIC15.67■□□□□ 0.1
RAB40CQ96S21 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 OR6D1P-202ENST00000641007 5290 ntBASIC15.67■□□□□ 0.1
RAB40CQ96S21 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
RAB40CQ96S21 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.67■□□□□ 0.1
RAB40CQ96S21 USP39-202ENST00000409025 1946 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.66■□□□□ 0.1
RAB40CQ96S21 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
RAB40CQ96S21 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms