Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX27Q96L92 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX27Q96L92 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SNX27Q96L92 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX27Q96L92 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.91■□□□□ 0.94
SNX27Q96L92 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.91■□□□□ 0.94
SNX27Q96L92 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX27Q96L92 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX27Q96L92 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX27Q96L92 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SNX27Q96L92 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC20.91■□□□□ 0.94
SNX27Q96L92 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC20.91■□□□□ 0.94
SNX27Q96L92 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX27Q96L92 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
SNX27Q96L92 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.9■□□□□ 0.94
SNX27Q96L92 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX27Q96L92 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX27Q96L92 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX27Q96L92 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX27Q96L92 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 CRYGFP-201ENST00000418459 633 ntBASIC20.9■□□□□ 0.94
SNX27Q96L92 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX27Q96L92 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.9■□□□□ 0.94
SNX27Q96L92 AC010947.1-201ENST00000623454 693 ntBASIC20.9■□□□□ 0.94
SNX27Q96L92 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX27Q96L92 VPS72-207ENST00000640458 689 ntTSL 5 BASIC20.9■□□□□ 0.94
SNX27Q96L92 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SNX27Q96L92 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SNX27Q96L92 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 AC096733.2-201ENST00000609937 1394 ntBASIC20.89■□□□□ 0.93
SNX27Q96L92 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.89■□□□□ 0.93
SNX27Q96L92 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX27Q96L92 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.89■□□□□ 0.93
SNX27Q96L92 NAPSB-206ENST00000562112 1266 ntBASIC20.89■□□□□ 0.93
SNX27Q96L92 SLC25A1P4-201ENST00000567977 778 ntBASIC20.89■□□□□ 0.93
SNX27Q96L92 AC145285.6-201ENST00000604632 637 ntBASIC20.89■□□□□ 0.93
SNX27Q96L92 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC20.89■□□□□ 0.93
SNX27Q96L92 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 AC104417.2-201ENST00000562989 1793 ntBASIC20.89■□□□□ 0.93
SNX27Q96L92 ZNF815P-204ENST00000434898 1737 ntBASIC20.89■□□□□ 0.93
SNX27Q96L92 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC20.89■□□□□ 0.93
SNX27Q96L92 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SNX27Q96L92 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.88■□□□□ 0.93
SNX27Q96L92 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC20.88■□□□□ 0.93
SNX27Q96L92 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX27Q96L92 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC20.88■□□□□ 0.93
SNX27Q96L92 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SNX27Q96L92 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.88■□□□□ 0.93
SNX27Q96L92 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX27Q96L92 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SNX27Q96L92 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
SNX27Q96L92 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SNX27Q96L92 AC125437.2-201ENST00000625180 2167 ntBASIC20.87■□□□□ 0.93
SNX27Q96L92 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX27Q96L92 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.87■□□□□ 0.93
SNX27Q96L92 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
SNX27Q96L92 MFAP1P1-201ENST00000442257 1255 ntBASIC20.87■□□□□ 0.93
SNX27Q96L92 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX27Q96L92 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
SNX27Q96L92 AC006538.3-201ENST00000612495 578 ntBASIC20.87■□□□□ 0.93
SNX27Q96L92 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC20.87■□□□□ 0.93
SNX27Q96L92 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.87■□□□□ 0.93
SNX27Q96L92 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SNX27Q96L92 TREX1-205ENST00000625293 1783 ntBASIC20.87■□□□□ 0.93
SNX27Q96L92 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SNX27Q96L92 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.86■□□□□ 0.93
SNX27Q96L92 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
SNX27Q96L92 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SNX27Q96L92 PCDHAC2-203ENST00000615316 3011 ntBASIC20.86■□□□□ 0.93
SNX27Q96L92 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms