Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 AC079598.2-202ENST00000546624 1451 ntBASIC16.25■□□□□ 0.19
TIMD4Q96H15 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 FITM1-202ENST00000559294 800 ntBASIC16.25■□□□□ 0.19
TIMD4Q96H15 C2orf69P3-201ENST00000565542 1120 ntBASIC16.25■□□□□ 0.19
TIMD4Q96H15 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 RCC2P6-201ENST00000526625 1557 ntBASIC16.25■□□□□ 0.19
TIMD4Q96H15 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TIMD4Q96H15 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.25■□□□□ 0.19
TIMD4Q96H15 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 FAM207BP-201ENST00000447172 505 ntBASIC16.24■□□□□ 0.19
TIMD4Q96H15 AC097488.1-201ENST00000507834 756 ntBASIC16.24■□□□□ 0.19
TIMD4Q96H15 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.24■□□□□ 0.19
TIMD4Q96H15 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TIMD4Q96H15 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 LINC01521-201ENST00000504184 1943 ntBASIC16.23■□□□□ 0.19
TIMD4Q96H15 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 USP39-204ENST00000409766 2033 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 CRYGFP-201ENST00000418459 633 ntBASIC16.23■□□□□ 0.19
TIMD4Q96H15 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 SLC25A1P4-201ENST00000567977 778 ntBASIC16.23■□□□□ 0.19
TIMD4Q96H15 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
TIMD4Q96H15 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
TIMD4Q96H15 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
TIMD4Q96H15 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.22■□□□□ 0.19
TIMD4Q96H15 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.22■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms