Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SIPA1Q96FS4 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIPA1Q96FS4 AL391422.3-201ENST00000603791 2761 ntBASIC19.39■□□□□ 0.7
SIPA1Q96FS4 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SIPA1Q96FS4 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
SIPA1Q96FS4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SIPA1Q96FS4 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 RNF152P1-201ENST00000397754 604 ntBASIC19.39■□□□□ 0.69
SIPA1Q96FS4 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 GXYLT1P6-201ENST00000456472 1187 ntBASIC19.39■□□□□ 0.69
SIPA1Q96FS4 CA15P1-201ENST00000481698 905 ntBASIC19.39■□□□□ 0.69
SIPA1Q96FS4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 CKBP1-201ENST00000565489 1086 ntBASIC19.39■□□□□ 0.69
SIPA1Q96FS4 AL512604.3-201ENST00000569583 964 ntBASIC19.39■□□□□ 0.69
SIPA1Q96FS4 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 KRT8P41-201ENST00000533985 1514 ntBASIC19.39■□□□□ 0.69
SIPA1Q96FS4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SIPA1Q96FS4 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 COX11P1-201ENST00000489116 835 ntBASIC19.38■□□□□ 0.69
SIPA1Q96FS4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SIPA1Q96FS4 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 AL162377.1-201ENST00000618844 1793 ntBASIC19.37■□□□□ 0.69
SIPA1Q96FS4 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 AC141257.4-201ENST00000634557 245 ntBASIC19.37■□□□□ 0.69
SIPA1Q96FS4 AC136944.6-201ENST00000634818 245 ntBASIC19.37■□□□□ 0.69
SIPA1Q96FS4 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.37■□□□□ 0.69
SIPA1Q96FS4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 CD70-202ENST00000423145 881 ntTSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 YBX1P2-201ENST00000489612 999 ntBASIC19.36■□□□□ 0.69
SIPA1Q96FS4 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SIPA1Q96FS4 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIPA1Q96FS4 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC19.35■□□□□ 0.69
SIPA1Q96FS4 GABARAPL3-202ENST00000624044 1851 ntBASIC19.35■□□□□ 0.69
SIPA1Q96FS4 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SIPA1Q96FS4 COPE-203ENST00000351079 907 ntTSL 2 BASIC19.35■□□□□ 0.69
SIPA1Q96FS4 FAM8A6P-201ENST00000407496 1135 ntBASIC19.35■□□□□ 0.69
SIPA1Q96FS4 TSPY5P-201ENST00000426936 936 ntBASIC19.35■□□□□ 0.69
SIPA1Q96FS4 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.35■□□□□ 0.69
SIPA1Q96FS4 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms