Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 DFFB-212ENST00000625756 649 ntTSL 5 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 KRT8P41-201ENST00000533985 1514 ntBASIC17.42■□□□□ 0.38
SNRNP40Q96DI7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 FXN-203ENST00000396366 922 ntTSL 2 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 ZNF444P1-201ENST00000559497 298 ntBASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNRNP40Q96DI7 BX119927.1-201ENST00000636596 1552 ntBASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 AP001271.2-201ENST00000624018 1556 ntBASIC17.4■□□□□ 0.38
SNRNP40Q96DI7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
SNRNP40Q96DI7 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.39■□□□□ 0.38
SNRNP40Q96DI7 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SNRNP40Q96DI7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 AC083849.1-201ENST00000615227 514 ntBASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 AL691432.3-201ENST00000621860 400 ntBASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 AL137060.1-201ENST00000618151 2648 ntBASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC17.39■□□□□ 0.37
SNRNP40Q96DI7 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 STARP1-201ENST00000397973 869 ntBASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNRNP40Q96DI7 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms