Protein–RNA interactions for Protein: Q96BI3

APH1A, Gamma-secretase subunit APH-1A, humanhuman

Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1AQ96BI3 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 ADM-207ENST00000530439 1839 ntTSL 2 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
APH1AQ96BI3 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
APH1AQ96BI3 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.15■□□□□ 0.34
APH1AQ96BI3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 AL596275.1-201ENST00000423464 877 ntBASIC17.15■□□□□ 0.34
APH1AQ96BI3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 AC026271.3-201ENST00000571884 352 ntBASIC17.15■□□□□ 0.34
APH1AQ96BI3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 AC026471.5-201ENST00000615068 467 ntBASIC17.15■□□□□ 0.34
APH1AQ96BI3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
APH1AQ96BI3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC17.15■□□□□ 0.34
APH1AQ96BI3 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
APH1AQ96BI3 BID-204ENST00000399767 2129 ntTSL 2 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.14■□□□□ 0.33
APH1AQ96BI3 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
APH1AQ96BI3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
APH1AQ96BI3 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 NUDT16P1-203ENST00000513809 620 ntBASIC17.13■□□□□ 0.33
APH1AQ96BI3 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 AL160286.2-201ENST00000567150 934 ntBASIC17.13■□□□□ 0.33
APH1AQ96BI3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
APH1AQ96BI3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
APH1AQ96BI3 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.12■□□□□ 0.33
APH1AQ96BI3 AC125437.2-201ENST00000625180 2167 ntBASIC17.12■□□□□ 0.33
APH1AQ96BI3 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms