Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
HPS1Q92902 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.61■□□□□ 0.41
HPS1Q92902 BMP1-204ENST00000397814 836 ntTSL 4 BASIC17.61■□□□□ 0.41
HPS1Q92902 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC17.61■□□□□ 0.41
HPS1Q92902 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 AL138781.1-201ENST00000566567 1274 ntBASIC17.61■□□□□ 0.41
HPS1Q92902 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 OR10C1-204ENST00000622521 1039 ntBASIC17.61■□□□□ 0.41
HPS1Q92902 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
HPS1Q92902 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC17.61■□□□□ 0.41
HPS1Q92902 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.61■□□□□ 0.41
HPS1Q92902 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.61■□□□□ 0.41
HPS1Q92902 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
HPS1Q92902 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
HPS1Q92902 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 AC135050.7-201ENST00000624508 2218 ntBASIC17.6■□□□□ 0.41
HPS1Q92902 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.6■□□□□ 0.41
HPS1Q92902 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS1Q92902 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
HPS1Q92902 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS1Q92902 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 MIR4758-201ENST00000577688 71 ntBASIC17.6■□□□□ 0.41
HPS1Q92902 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS1Q92902 AC008694.1-202ENST00000636953 945 ntBASIC17.6■□□□□ 0.41
HPS1Q92902 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC17.6■□□□□ 0.41
HPS1Q92902 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.6■□□□□ 0.41
HPS1Q92902 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
HPS1Q92902 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS1Q92902 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.6■□□□□ 0.41
HPS1Q92902 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HPS1Q92902 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
HPS1Q92902 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 AC009113.1-201ENST00000570267 2443 ntBASIC17.59■□□□□ 0.41
HPS1Q92902 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.59■□□□□ 0.41
HPS1Q92902 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS1Q92902 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS1Q92902 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.59■□□□□ 0.41
HPS1Q92902 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
HPS1Q92902 AC069236.1-201ENST00000604339 616 ntBASIC17.59■□□□□ 0.41
HPS1Q92902 AC243732.1-201ENST00000612648 864 ntBASIC17.59■□□□□ 0.41
HPS1Q92902 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC17.59■□□□□ 0.41
HPS1Q92902 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.59■□□□□ 0.41
HPS1Q92902 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
HPS1Q92902 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
HPS1Q92902 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.58■□□□□ 0.41
HPS1Q92902 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.58■□□□□ 0.41
HPS1Q92902 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 TNRC18P3-201ENST00000441896 2691 ntBASIC17.58■□□□□ 0.41
HPS1Q92902 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC17.58■□□□□ 0.41
HPS1Q92902 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
HPS1Q92902 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
HPS1Q92902 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.58■□□□□ 0.41
HPS1Q92902 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
HPS1Q92902 AC068338.2-201ENST00000563278 1430 ntBASIC17.58■□□□□ 0.41
HPS1Q92902 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
HPS1Q92902 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
HPS1Q92902 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 16.9 ms