Protein–RNA interactions for Protein: Q92529

SHC3, SHC-transforming protein 3, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC3Q92529 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.66■□□□□ 0.9
SHC3Q92529 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.66■□□□□ 0.9
SHC3Q92529 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SHC3Q92529 AL161938.1-201ENST00000569833 2180 ntBASIC20.66■□□□□ 0.9
SHC3Q92529 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
SHC3Q92529 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.65■□□□□ 0.9
SHC3Q92529 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.65■□□□□ 0.9
SHC3Q92529 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC20.65■□□□□ 0.9
SHC3Q92529 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.65■□□□□ 0.9
SHC3Q92529 AC110285.5-201ENST00000611501 352 ntBASIC20.65■□□□□ 0.9
SHC3Q92529 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SHC3Q92529 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
SHC3Q92529 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHC3Q92529 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.9
SHC3Q92529 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHC3Q92529 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
SHC3Q92529 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
SHC3Q92529 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.64■□□□□ 0.9
SHC3Q92529 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC20.64■□□□□ 0.89
SHC3Q92529 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
SHC3Q92529 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.64■□□□□ 0.89
SHC3Q92529 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.64■□□□□ 0.89
SHC3Q92529 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC3Q92529 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
SHC3Q92529 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC3Q92529 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC20.64■□□□□ 0.89
SHC3Q92529 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
SHC3Q92529 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.63■□□□□ 0.89
SHC3Q92529 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC3Q92529 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC3Q92529 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC20.63■□□□□ 0.89
SHC3Q92529 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC3Q92529 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
SHC3Q92529 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.63■□□□□ 0.89
SHC3Q92529 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
SHC3Q92529 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC20.63■□□□□ 0.89
SHC3Q92529 TNXA-203ENST00000507684 2038 ntBASIC20.63■□□□□ 0.89
SHC3Q92529 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
SHC3Q92529 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.62■□□□□ 0.89
SHC3Q92529 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC20.62■□□□□ 0.89
SHC3Q92529 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
SHC3Q92529 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 AL160286.2-201ENST00000567150 934 ntBASIC20.62■□□□□ 0.89
SHC3Q92529 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.62■□□□□ 0.89
SHC3Q92529 MMD2-204ENST00000612910 778 ntTSL 5 BASIC20.62■□□□□ 0.89
SHC3Q92529 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.62■□□□□ 0.89
SHC3Q92529 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC20.62■□□□□ 0.89
SHC3Q92529 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
SHC3Q92529 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
SHC3Q92529 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
SHC3Q92529 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC20.61■□□□□ 0.89
SHC3Q92529 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC20.61■□□□□ 0.89
SHC3Q92529 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 AL049812.1-201ENST00000432563 2267 ntBASIC20.61■□□□□ 0.89
SHC3Q92529 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
SHC3Q92529 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
SHC3Q92529 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC20.61■□□□□ 0.89
SHC3Q92529 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
SHC3Q92529 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms