Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 AC091390.4-202ENST00000476426 537 ntBASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC20.32■□□□□ 0.84
SHKBP1Q8TBC3 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AP001271.2-201ENST00000624018 1556 ntBASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 LIN28AP1-201ENST00000429574 405 ntBASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AC128688.1-201ENST00000487626 519 ntBASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AC006011.2-201ENST00000621313 1158 ntBASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AC096733.2-201ENST00000609937 1394 ntBASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.31■□□□□ 0.84
SHKBP1Q8TBC3 LGALS8-AS1-201ENST00000487567 1457 ntBASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 AC087289.5-201ENST00000586076 3175 ntBASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 ATP5G1P1-201ENST00000448724 379 ntBASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
SHKBP1Q8TBC3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 NTF6B-201ENST00000591913 560 ntBASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
SHKBP1Q8TBC3 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 MCC-208ENST00000514701 2855 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 AC112907.3-201ENST00000577781 2400 ntBASIC20.28■□□□□ 0.84
SHKBP1Q8TBC3 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms