Protein–RNA interactions for Protein: Q8N9I9

DTX3, Probable E3 ubiquitin-protein ligase DTX3, humanhuman

Predictions only

Length 347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DTX3Q8N9I9 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 BID-214ENST00000617586 542 ntTSL 5 BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 AC120498.10-201ENST00000621827 505 ntBASIC17.06■□□□□ 0.32
DTX3Q8N9I9 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
DTX3Q8N9I9 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AC093627.4-202ENST00000479592 591 ntTSL 4 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 IKBKGP1-201ENST00000612193 1073 ntBASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 AC020916.1-201ENST00000587762 1774 ntBASIC17.05■□□□□ 0.32
DTX3Q8N9I9 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
DTX3Q8N9I9 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 DBI-210ENST00000542275 757 ntTSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
DTX3Q8N9I9 AL161938.1-201ENST00000569833 2180 ntBASIC17.04■□□□□ 0.32
DTX3Q8N9I9 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DTX3Q8N9I9 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms