Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 AC120498.9-201ENST00000339021 3867 ntBASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 ID1-201ENST00000376105 1233 ntBASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 TUBB8P6-201ENST00000436895 1288 ntBASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 LINC01465-201ENST00000408887 1940 ntBASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 AC141586.3-201ENST00000562166 1838 ntBASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
LSMEM1Q8N8F7 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 EMC9-206ENST00000560403 872 ntTSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC17.69■□□□□ 0.42
LSMEM1Q8N8F7 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 AC008403.3-201ENST00000598924 454 ntBASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
LSMEM1Q8N8F7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.67■□□□□ 0.42
LSMEM1Q8N8F7 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms