Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.89■□□□□ 0.62
CPSF7Q8N684 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.89■□□□□ 0.62
CPSF7Q8N684 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 LSM12P1-201ENST00000411836 588 ntBASIC18.89■□□□□ 0.61
CPSF7Q8N684 SERPINH1P1-201ENST00000419794 1249 ntBASIC18.89■□□□□ 0.61
CPSF7Q8N684 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.89■□□□□ 0.61
CPSF7Q8N684 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC18.89■□□□□ 0.61
CPSF7Q8N684 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CPSF7Q8N684 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 AC141586.3-201ENST00000562166 1838 ntBASIC18.88■□□□□ 0.61
CPSF7Q8N684 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 AC100791.3-201ENST00000617619 330 ntBASIC18.88■□□□□ 0.61
CPSF7Q8N684 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.88■□□□□ 0.61
CPSF7Q8N684 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CPSF7Q8N684 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 KRT17P1-201ENST00000399211 1546 ntBASIC18.87■□□□□ 0.61
CPSF7Q8N684 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 AC009113.1-201ENST00000570267 2443 ntBASIC18.87■□□□□ 0.61
CPSF7Q8N684 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.87■□□□□ 0.61
CPSF7Q8N684 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 AIRN-201ENST00000601203 4374 ntBASIC18.87■□□□□ 0.61
CPSF7Q8N684 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CPSF7Q8N684 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CPSF7Q8N684 MCRIP2P1-201ENST00000394346 511 ntBASIC18.86■□□□□ 0.61
CPSF7Q8N684 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC18.86■□□□□ 0.61
CPSF7Q8N684 POU5F1P3-201ENST00000428824 1078 ntBASIC18.86■□□□□ 0.61
CPSF7Q8N684 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.86■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms