Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 IER3-202ENST00000376377 1350 ntBASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
SYNPOQ8N3V7 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 KRT18P48-201ENST00000434763 852 ntBASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 AC008622.2-201ENST00000617006 1229 ntBASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SYNPOQ8N3V7 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 AP000523.1-201ENST00000398242 1049 ntBASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SYNPOQ8N3V7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 AL671277.2-201ENST00000458060 996 ntBASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.65■□□□□ 0.74
SYNPOQ8N3V7 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
SYNPOQ8N3V7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SYNPOQ8N3V7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 CKBP1-201ENST00000565489 1086 ntBASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 AP001271.2-201ENST00000624018 1556 ntBASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SYNPOQ8N3V7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms