Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
LRRTM1Q86UE6 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 HSCB-202ENST00000398941 955 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRRTM1Q86UE6 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 KRT17P1-201ENST00000399211 1546 ntBASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 CALM3-202ENST00000391918 702 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 AC137761.2-201ENST00000561729 223 ntBASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 AC145350.3-201ENST00000569033 163 ntBASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LRRTM1Q86UE6 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 AC010980.2-201ENST00000587099 1412 ntBASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRRTM1Q86UE6 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 BET1L-204ENST00000410108 637 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 LGR4-203ENST00000480977 492 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 AC011767.1-201ENST00000617410 1153 ntBASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 BID-214ENST00000617586 542 ntTSL 5 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 AL512353.2-201ENST00000448759 1962 ntBASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.76■□□□□ 0.27
LRRTM1Q86UE6 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms