Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 KRT17P3-201ENST00000420566 1262 ntBASIC17.8■□□□□ 0.44
ZNF550Q7Z398 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 KRT18P16-201ENST00000510337 1294 ntBASIC17.8■□□□□ 0.44
ZNF550Q7Z398 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ZNF550Q7Z398 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 C1QBPP2-201ENST00000528754 825 ntBASIC17.79■□□□□ 0.44
ZNF550Q7Z398 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AL359736.2-201ENST00000621992 437 ntBASIC17.79■□□□□ 0.44
ZNF550Q7Z398 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 ANKRD18DP-204ENST00000455355 1975 ntBASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC17.79■□□□□ 0.44
ZNF550Q7Z398 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 FAM197Y4-202ENST00000622692 608 ntBASIC17.78■□□□□ 0.44
ZNF550Q7Z398 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC17.78■□□□□ 0.44
ZNF550Q7Z398 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 AC120498.9-201ENST00000339021 3867 ntBASIC17.77■□□□□ 0.44
ZNF550Q7Z398 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZNF550Q7Z398 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms