Protein–RNA interactions for Protein: Q7L5N1

COPS6, COP9 signalosome complex subunit 6, humanhuman

Predictions only

Length 327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS6Q7L5N1 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC24.46■■□□□ 1.51
COPS6Q7L5N1 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC24.45■■□□□ 1.51
COPS6Q7L5N1 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC24.45■■□□□ 1.51
COPS6Q7L5N1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC24.45■■□□□ 1.51
COPS6Q7L5N1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.51
COPS6Q7L5N1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
COPS6Q7L5N1 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 TSPY17P-201ENST00000450329 467 ntBASIC24.45■■□□□ 1.5
COPS6Q7L5N1 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 LINC01521-201ENST00000504184 1943 ntBASIC24.45■■□□□ 1.5
COPS6Q7L5N1 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC24.45■■□□□ 1.5
COPS6Q7L5N1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 BX664615.1-201ENST00000443558 458 ntBASIC24.44■■□□□ 1.5
COPS6Q7L5N1 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 WWOX-216ENST00000569818 525 ntBASIC24.44■■□□□ 1.5
COPS6Q7L5N1 NTF6B-201ENST00000591913 560 ntBASIC24.44■■□□□ 1.5
COPS6Q7L5N1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
COPS6Q7L5N1 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 CA15P1-201ENST00000481698 905 ntBASIC24.43■■□□□ 1.5
COPS6Q7L5N1 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 ZNF815P-204ENST00000434898 1737 ntBASIC24.43■■□□□ 1.5
COPS6Q7L5N1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC24.43■■□□□ 1.5
COPS6Q7L5N1 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 AC117947.1-201ENST00000427448 529 ntBASIC24.42■■□□□ 1.5
COPS6Q7L5N1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC24.42■■□□□ 1.5
COPS6Q7L5N1 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC24.41■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms