Protein–RNA interactions for Protein: Q6WKZ4

RAB11FIP1, Rab11 family-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP1Q6WKZ4 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP1Q6WKZ4 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.46■□□□□ 0.71
RAB11FIP1Q6WKZ4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.46■□□□□ 0.71
RAB11FIP1Q6WKZ4 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
RAB11FIP1Q6WKZ4 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 AL137013.1-201ENST00000432946 1228 ntBASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC091390.4-202ENST00000476426 537 ntBASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 CLN6-221ENST00000637494 765 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC092865.7-201ENST00000641832 219 ntBASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
RAB11FIP1Q6WKZ4 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC113347.1-201ENST00000413321 391 ntBASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 KRT18P57-201ENST00000443599 1254 ntBASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 Z85996.1-201ENST00000494644 937 ntBASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
RAB11FIP1Q6WKZ4 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 SLC25A3P1-201ENST00000443844 931 ntBASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 ECEL1P2-202ENST00000465689 757 ntBASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 EGLN1P1-201ENST00000531623 762 ntBASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
RAB11FIP1Q6WKZ4 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 TSPY14P-201ENST00000303979 915 ntBASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 MFAP1P1-201ENST00000442257 1255 ntBASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
RAB11FIP1Q6WKZ4 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.41■□□□□ 0.7
RAB11FIP1Q6WKZ4 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms