Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 AC010327.4-202ENST00000591484 748 ntBASIC18.84■□□□□ 0.61
RIF1Q5UIP0 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
RIF1Q5UIP0 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
RIF1Q5UIP0 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 AC074051.2-201ENST00000565115 352 ntBASIC18.83■□□□□ 0.6
RIF1Q5UIP0 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.83■□□□□ 0.6
RIF1Q5UIP0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.83■□□□□ 0.6
RIF1Q5UIP0 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
RIF1Q5UIP0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 AKR1C7P-201ENST00000305623 895 ntBASIC18.82■□□□□ 0.6
RIF1Q5UIP0 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 RPL13AP23-201ENST00000480739 586 ntBASIC18.82■□□□□ 0.6
RIF1Q5UIP0 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 NMU-202ENST00000505262 693 ntTSL 3 BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.82■□□□□ 0.6
RIF1Q5UIP0 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 AC242852.2-201ENST00000615738 1807 ntBASIC18.81■□□□□ 0.6
RIF1Q5UIP0 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 AC098831.1-202ENST00000438821 336 ntBASIC18.81■□□□□ 0.6
RIF1Q5UIP0 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 AC148477.8-201ENST00000624298 468 ntBASIC18.81■□□□□ 0.6
RIF1Q5UIP0 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
RIF1Q5UIP0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 AC004967.1-201ENST00000453589 447 ntBASIC18.8■□□□□ 0.6
RIF1Q5UIP0 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 AC009065.1-201ENST00000564055 1225 ntBASIC18.8■□□□□ 0.6
RIF1Q5UIP0 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC18.8■□□□□ 0.6
RIF1Q5UIP0 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms