Protein–RNA interactions for Protein: Q5T6M2

LINC00242, Putative uncharacterized protein encoded by LINC00242, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00242Q5T6M2 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 AC068338.2-201ENST00000563278 1430 ntBASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC13.23□□□□□ -0.29
LINC00242Q5T6M2 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 SPI1-203ENST00000533030 661 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 AL589743.5-201ENST00000616611 1050 ntBASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 AC005332.8-201ENST00000622750 2735 ntBASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC13.22□□□□□ -0.29
LINC00242Q5T6M2 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 AC018470.1-201ENST00000624790 3129 ntBASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 AL355472.2-201ENST00000422958 438 ntBASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 DBI-210ENST00000542275 757 ntTSL 5 BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 NTF6G-201ENST00000591094 616 ntBASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 FP475955.4-201ENST00000623131 1990 ntBASIC13.21□□□□□ -0.29
LINC00242Q5T6M2 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
LINC00242Q5T6M2 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC13.21□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms