Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
VARS2Q5ST30 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.5■□□□□ 0.87
VARS2Q5ST30 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.49■□□□□ 0.87
VARS2Q5ST30 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
VARS2Q5ST30 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
VARS2Q5ST30 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 AC010653.2-201ENST00000623505 997 ntBASIC20.48■□□□□ 0.87
VARS2Q5ST30 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
VARS2Q5ST30 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
VARS2Q5ST30 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 TSPY17P-201ENST00000450329 467 ntBASIC20.47■□□□□ 0.87
VARS2Q5ST30 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC20.47■□□□□ 0.87
VARS2Q5ST30 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
VARS2Q5ST30 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
VARS2Q5ST30 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 KRT8P11-201ENST00000409686 1436 ntBASIC20.46■□□□□ 0.87
VARS2Q5ST30 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 CA15P1-201ENST00000481698 905 ntBASIC20.46■□□□□ 0.87
VARS2Q5ST30 AL353719.1-201ENST00000566847 864 ntBASIC20.46■□□□□ 0.87
VARS2Q5ST30 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 AC104417.2-201ENST00000562989 1793 ntBASIC20.46■□□□□ 0.87
VARS2Q5ST30 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 NF2-201ENST00000334961 2020 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC20.46■□□□□ 0.87
VARS2Q5ST30 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
VARS2Q5ST30 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
VARS2Q5ST30 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.45■□□□□ 0.86
VARS2Q5ST30 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms