Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRK2Q5S007 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LRRK2Q5S007 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.83■□□□□ 0.28
LRRK2Q5S007 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 AC036111.1-201ENST00000533973 1582 ntBASIC16.82■□□□□ 0.28
LRRK2Q5S007 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 MIR940-201ENST00000401276 94 ntBASIC16.82■□□□□ 0.28
LRRK2Q5S007 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 RNPS1P1-201ENST00000507437 918 ntBASIC16.82■□□□□ 0.28
LRRK2Q5S007 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 RNF126P1-202ENST00000569893 925 ntBASIC16.82■□□□□ 0.28
LRRK2Q5S007 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LRRK2Q5S007 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC16.82■□□□□ 0.28
LRRK2Q5S007 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 KRT8P26-201ENST00000534154 1276 ntBASIC16.81■□□□□ 0.28
LRRK2Q5S007 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 CASK-201ENST00000378154 2494 ntTSL 5 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 HTR5BP-201ENST00000430851 1154 ntBASIC16.81■□□□□ 0.28
LRRK2Q5S007 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 LINC00265-3P-201ENST00000447588 903 ntBASIC16.81■□□□□ 0.28
LRRK2Q5S007 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.81■□□□□ 0.28
LRRK2Q5S007 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
LRRK2Q5S007 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 PNN-202ENST00000553331 656 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 PIN1-206ENST00000587625 878 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
LRRK2Q5S007 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.8■□□□□ 0.28
LRRK2Q5S007 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 AC104819.1-201ENST00000504587 486 ntBASIC16.79■□□□□ 0.28
LRRK2Q5S007 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
LRRK2Q5S007 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC16.79■□□□□ 0.28
LRRK2Q5S007 AKR1C7P-201ENST00000305623 895 ntBASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms