Protein–RNA interactions for Protein: Q495M9

USH1G, Usher syndrome type-1G protein, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH1GQ495M9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.23■■□□□ 1.15
USH1GQ495M9 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USH1GQ495M9 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC22.23■■□□□ 1.15
USH1GQ495M9 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
USH1GQ495M9 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC22.23■■□□□ 1.15
USH1GQ495M9 CRAT-202ENST00000393384 973 ntTSL 2 BASIC22.23■■□□□ 1.15
USH1GQ495M9 MFAP1P1-201ENST00000442257 1255 ntBASIC22.23■■□□□ 1.15
USH1GQ495M9 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC22.23■■□□□ 1.15
USH1GQ495M9 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC22.23■■□□□ 1.15
USH1GQ495M9 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.23■■□□□ 1.15
USH1GQ495M9 DUT-205ENST00000558813 769 ntTSL 2 BASIC22.23■■□□□ 1.15
USH1GQ495M9 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
USH1GQ495M9 CYGB-204ENST00000589342 815 ntTSL 3 BASIC22.23■■□□□ 1.15
USH1GQ495M9 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
USH1GQ495M9 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC22.23■■□□□ 1.15
USH1GQ495M9 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC22.23■■□□□ 1.15
USH1GQ495M9 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
USH1GQ495M9 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.23■■□□□ 1.15
USH1GQ495M9 ANKRD18DP-204ENST00000455355 1975 ntBASIC22.23■■□□□ 1.15
USH1GQ495M9 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC22.22■■□□□ 1.15
USH1GQ495M9 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 C2orf69P3-201ENST00000565542 1120 ntBASIC22.22■■□□□ 1.15
USH1GQ495M9 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC22.22■■□□□ 1.15
USH1GQ495M9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC22.22■■□□□ 1.15
USH1GQ495M9 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC22.22■■□□□ 1.15
USH1GQ495M9 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.22■■□□□ 1.15
USH1GQ495M9 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.22■■□□□ 1.15
USH1GQ495M9 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC22.22■■□□□ 1.15
USH1GQ495M9 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 KRT8P41-201ENST00000533985 1514 ntBASIC22.21■■□□□ 1.15
USH1GQ495M9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC22.21■■□□□ 1.15
USH1GQ495M9 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC22.21■■□□□ 1.15
USH1GQ495M9 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.21■■□□□ 1.15
USH1GQ495M9 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 AC005363.2-201ENST00000618631 242 ntBASIC22.21■■□□□ 1.15
USH1GQ495M9 KRT18P22-201ENST00000402024 1347 ntBASIC22.21■■□□□ 1.15
USH1GQ495M9 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
USH1GQ495M9 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC22.21■■□□□ 1.15
USH1GQ495M9 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC22.21■■□□□ 1.15
USH1GQ495M9 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
USH1GQ495M9 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC22.2■■□□□ 1.15
USH1GQ495M9 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
USH1GQ495M9 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
USH1GQ495M9 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.2■■□□□ 1.14
USH1GQ495M9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 RN7SL850P-201ENST00000579959 291 ntBASIC22.2■■□□□ 1.14
USH1GQ495M9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC22.2■■□□□ 1.14
USH1GQ495M9 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.2■■□□□ 1.14
USH1GQ495M9 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC22.2■■□□□ 1.14
USH1GQ495M9 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.2■■□□□ 1.14
USH1GQ495M9 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC22.19■■□□□ 1.14
USH1GQ495M9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.19■■□□□ 1.14
USH1GQ495M9 PWWP2AP1-201ENST00000429776 2273 ntBASIC22.19■■□□□ 1.14
USH1GQ495M9 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC22.19■■□□□ 1.14
USH1GQ495M9 INGX-201ENST00000359239 846 ntBASIC22.19■■□□□ 1.14
USH1GQ495M9 AC005521.1-201ENST00000393351 872 ntBASIC22.19■■□□□ 1.14
USH1GQ495M9 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC22.19■■□□□ 1.14
USH1GQ495M9 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC22.19■■□□□ 1.14
USH1GQ495M9 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC22.19■■□□□ 1.14
USH1GQ495M9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC22.19■■□□□ 1.14
USH1GQ495M9 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms