Protein–RNA interactions for Protein: P84243

H3F3A, Histone H3.3, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3AP84243 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
H3F3AP84243 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
H3F3AP84243 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.31■□□□□ 0.36
H3F3AP84243 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.31■□□□□ 0.36
H3F3AP84243 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.31■□□□□ 0.36
H3F3AP84243 USP36-216ENST00000589424 970 ntTSL 5 BASIC17.31■□□□□ 0.36
H3F3AP84243 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.31■□□□□ 0.36
H3F3AP84243 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
H3F3AP84243 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
H3F3AP84243 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
H3F3AP84243 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
H3F3AP84243 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC17.3■□□□□ 0.36
H3F3AP84243 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3AP84243 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
H3F3AP84243 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3AP84243 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 RPS2P55-201ENST00000397318 883 ntBASIC17.3■□□□□ 0.36
H3F3AP84243 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 AC012618.2-201ENST00000428058 849 ntBASIC17.3■□□□□ 0.36
H3F3AP84243 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3AP84243 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.3■□□□□ 0.36
H3F3AP84243 AP002982.1-201ENST00000492365 877 ntBASIC17.3■□□□□ 0.36
H3F3AP84243 AC107956.1-201ENST00000494359 873 ntBASIC17.3■□□□□ 0.36
H3F3AP84243 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.3■□□□□ 0.36
H3F3AP84243 AC233702.5-201ENST00000584107 538 ntBASIC17.3■□□□□ 0.36
H3F3AP84243 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.3■□□□□ 0.36
H3F3AP84243 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC17.3■□□□□ 0.36
H3F3AP84243 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
H3F3AP84243 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC17.29■□□□□ 0.36
H3F3AP84243 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.29■□□□□ 0.36
H3F3AP84243 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
H3F3AP84243 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
H3F3AP84243 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC17.29■□□□□ 0.36
H3F3AP84243 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 AL160286.2-201ENST00000567150 934 ntBASIC17.29■□□□□ 0.36
H3F3AP84243 AC073195.1-201ENST00000607241 877 ntBASIC17.29■□□□□ 0.36
H3F3AP84243 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.29■□□□□ 0.36
H3F3AP84243 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
H3F3AP84243 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC17.29■□□□□ 0.36
H3F3AP84243 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
H3F3AP84243 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC17.29■□□□□ 0.36
H3F3AP84243 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
H3F3AP84243 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC17.28■□□□□ 0.36
H3F3AP84243 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
H3F3AP84243 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC17.28■□□□□ 0.36
H3F3AP84243 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
H3F3AP84243 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.28■□□□□ 0.36
H3F3AP84243 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.28■□□□□ 0.36
H3F3AP84243 RPS2P4-201ENST00000476944 856 ntBASIC17.28■□□□□ 0.36
H3F3AP84243 AC008550.1-201ENST00000511500 884 ntBASIC17.28■□□□□ 0.36
H3F3AP84243 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC17.28■□□□□ 0.36
H3F3AP84243 Z99916.2-201ENST00000604037 246 ntBASIC17.28■□□□□ 0.36
H3F3AP84243 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.28■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms