Protein–RNA interactions for Protein: P84022

SMAD3, Mothers against decapentaplegic homolog 3, humanhuman

Known RBP Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3P84022 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.92■□□□□ 0.94
SMAD3P84022 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
SMAD3P84022 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 HBZP1-201ENST00000354915 429 ntBASIC20.92■□□□□ 0.94
SMAD3P84022 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.92■□□□□ 0.94
SMAD3P84022 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC20.92■□□□□ 0.94
SMAD3P84022 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.92■□□□□ 0.94
SMAD3P84022 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC20.92■□□□□ 0.94
SMAD3P84022 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 AC117500.6-201ENST00000624871 588 ntBASIC20.92■□□□□ 0.94
SMAD3P84022 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.92■□□□□ 0.94
SMAD3P84022 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.92■□□□□ 0.94
SMAD3P84022 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20.92■□□□□ 0.94
SMAD3P84022 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
SMAD3P84022 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMAD3P84022 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
SMAD3P84022 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
SMAD3P84022 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.91■□□□□ 0.94
SMAD3P84022 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 BX276092.5-203ENST00000456199 560 ntBASIC20.91■□□□□ 0.94
SMAD3P84022 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC20.91■□□□□ 0.94
SMAD3P84022 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.91■□□□□ 0.94
SMAD3P84022 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SMAD3P84022 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC20.91■□□□□ 0.94
SMAD3P84022 FP700111.2-201ENST00000619190 1892 ntBASIC20.91■□□□□ 0.94
SMAD3P84022 AC006128.1-201ENST00000624704 1661 ntBASIC20.91■□□□□ 0.94
SMAD3P84022 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
SMAD3P84022 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.91■□□□□ 0.94
SMAD3P84022 AC016734.2-201ENST00000624325 1377 ntBASIC20.9■□□□□ 0.94
SMAD3P84022 AC106795.1-205ENST00000512851 1056 ntBASIC20.9■□□□□ 0.94
SMAD3P84022 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC20.9■□□□□ 0.94
SMAD3P84022 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.9■□□□□ 0.94
SMAD3P84022 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD3P84022 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD3P84022 AC005229.4-201ENST00000610085 2198 ntBASIC20.9■□□□□ 0.94
SMAD3P84022 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD3P84022 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD3P84022 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
SMAD3P84022 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
SMAD3P84022 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.89■□□□□ 0.94
SMAD3P84022 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
SMAD3P84022 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD3P84022 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD3P84022 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.89■□□□□ 0.93
SMAD3P84022 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD3P84022 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC20.89■□□□□ 0.93
SMAD3P84022 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC20.89■□□□□ 0.93
SMAD3P84022 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC20.89■□□□□ 0.93
SMAD3P84022 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD3P84022 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
SMAD3P84022 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMAD3P84022 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SMAD3P84022 TSPY19P-201ENST00000418461 509 ntBASIC20.88■□□□□ 0.93
SMAD3P84022 TSPY18P-201ENST00000441642 509 ntBASIC20.88■□□□□ 0.93
SMAD3P84022 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC20.88■□□□□ 0.93
SMAD3P84022 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.88■□□□□ 0.93
SMAD3P84022 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD3P84022 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
SMAD3P84022 AC011498.5-201ENST00000592027 486 ntBASIC20.88■□□□□ 0.93
SMAD3P84022 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
SMAD3P84022 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC20.88■□□□□ 0.93
SMAD3P84022 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
SMAD3P84022 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD3P84022 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
SMAD3P84022 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD3P84022 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.88■□□□□ 0.93
SMAD3P84022 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD3P84022 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD3P84022 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC20.87■□□□□ 0.93
SMAD3P84022 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC20.87■□□□□ 0.93
SMAD3P84022 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC20.87■□□□□ 0.93
SMAD3P84022 KRT18P1-202ENST00000452408 1331 ntBASIC20.87■□□□□ 0.93
SMAD3P84022 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD3P84022 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.87■□□□□ 0.93
SMAD3P84022 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD3P84022 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC20.87■□□□□ 0.93
SMAD3P84022 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SMAD3P84022 AP002383.4-201ENST00000442518 975 ntBASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms