Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC13.52□□□□□ -0.25
CKS1BP61024 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CKS1BP61024 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC13.52□□□□□ -0.25
CKS1BP61024 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
CKS1BP61024 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC13.52□□□□□ -0.25
CKS1BP61024 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC13.52□□□□□ -0.25
CKS1BP61024 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC13.52□□□□□ -0.25
CKS1BP61024 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC13.52□□□□□ -0.25
CKS1BP61024 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC13.52□□□□□ -0.25
CKS1BP61024 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
CKS1BP61024 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.51□□□□□ -0.25
CKS1BP61024 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CKS1BP61024 PPFIA3-201ENST00000334186 4733 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CKS1BP61024 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CKS1BP61024 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CKS1BP61024 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC13.51□□□□□ -0.25
CKS1BP61024 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC13.51□□□□□ -0.25
CKS1BP61024 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
CKS1BP61024 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
CKS1BP61024 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
CKS1BP61024 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC13.51□□□□□ -0.25
CKS1BP61024 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CKS1BP61024 MTURN-203ENST00000409688 843 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS1BP61024 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CKS1BP61024 MIR2861-201ENST00000636310 90 ntBASIC13.51□□□□□ -0.25
CKS1BP61024 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
CKS1BP61024 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
CKS1BP61024 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC13.51□□□□□ -0.25
CKS1BP61024 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
CKS1BP61024 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CKS1BP61024 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CKS1BP61024 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 NME4-202ENST00000382940 766 ntTSL 3 BASIC13.5□□□□□ -0.25
CKS1BP61024 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC13.5□□□□□ -0.25
CKS1BP61024 AF213884.3-201ENST00000563833 479 ntBASIC13.5□□□□□ -0.25
CKS1BP61024 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC13.5□□□□□ -0.25
CKS1BP61024 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 NME4-211ENST00000620944 1193 ntTSL 2 BASIC13.5□□□□□ -0.25
CKS1BP61024 AL358852.1-201ENST00000623174 1268 ntBASIC13.5□□□□□ -0.25
CKS1BP61024 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CKS1BP61024 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
CKS1BP61024 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC13.49□□□□□ -0.25
CKS1BP61024 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
CKS1BP61024 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms