Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN6P56747 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC18.58■□□□□ 0.57
CLDN6P56747 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN6P56747 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
CLDN6P56747 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN6P56747 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN6P56747 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC18.58■□□□□ 0.56
CLDN6P56747 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN6P56747 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.58■□□□□ 0.56
CLDN6P56747 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN6P56747 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN6P56747 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.58■□□□□ 0.56
CLDN6P56747 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN6P56747 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
CLDN6P56747 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CLDN6P56747 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.57■□□□□ 0.56
CLDN6P56747 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN6P56747 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN6P56747 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CLDN6P56747 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.57■□□□□ 0.56
CLDN6P56747 AC112907.2-201ENST00000448639 330 ntBASIC18.57■□□□□ 0.56
CLDN6P56747 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC18.57■□□□□ 0.56
CLDN6P56747 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.57■□□□□ 0.56
CLDN6P56747 IRF5-214ENST00000613821 595 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN6P56747 AC083849.1-201ENST00000615227 514 ntBASIC18.57■□□□□ 0.56
CLDN6P56747 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.57■□□□□ 0.56
CLDN6P56747 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CLDN6P56747 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC18.57■□□□□ 0.56
CLDN6P56747 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN6P56747 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN6P56747 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN6P56747 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.56■□□□□ 0.56
CLDN6P56747 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC18.56■□□□□ 0.56
CLDN6P56747 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC18.56■□□□□ 0.56
CLDN6P56747 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN6P56747 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN6P56747 NDUFV2-AS1-203ENST00000608008 779 ntBASIC18.56■□□□□ 0.56
CLDN6P56747 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.56■□□□□ 0.56
CLDN6P56747 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CLDN6P56747 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN6P56747 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
CLDN6P56747 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CLDN6P56747 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.56■□□□□ 0.56
CLDN6P56747 KRT8P8-201ENST00000434750 1448 ntBASIC18.56■□□□□ 0.56
CLDN6P56747 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN6P56747 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLDN6P56747 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN6P56747 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN6P56747 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 AL160286.2-201ENST00000567150 934 ntBASIC18.55■□□□□ 0.56
CLDN6P56747 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC18.55■□□□□ 0.56
CLDN6P56747 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CLDN6P56747 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.55■□□□□ 0.56
CLDN6P56747 AL031432.5-201ENST00000641059 760 ntBASIC18.55■□□□□ 0.56
CLDN6P56747 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.55■□□□□ 0.56
CLDN6P56747 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.55■□□□□ 0.56
CLDN6P56747 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CLDN6P56747 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CLDN6P56747 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms