Protein–RNA interactions for Protein: P54709

ATP1B3, Sodium/potassium-transporting ATPase subunit beta-3, humanhuman

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP1B3P54709 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
ATP1B3P54709 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1B3P54709 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP1B3P54709 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
ATP1B3P54709 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP1B3P54709 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 SLC29A4P1-201ENST00000398760 971 ntBASIC16.77■□□□□ 0.28
ATP1B3P54709 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
ATP1B3P54709 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP1B3P54709 RAP2CP1-201ENST00000605103 478 ntBASIC16.77■□□□□ 0.28
ATP1B3P54709 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP1B3P54709 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP1B3P54709 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP1B3P54709 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
ATP1B3P54709 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP1B3P54709 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.77■□□□□ 0.27
ATP1B3P54709 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.27
ATP1B3P54709 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
ATP1B3P54709 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP1B3P54709 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP1B3P54709 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
ATP1B3P54709 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 DUSP5P2-201ENST00000426873 1033 ntBASIC16.76■□□□□ 0.27
ATP1B3P54709 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP1B3P54709 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP1B3P54709 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP1B3P54709 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC16.76■□□□□ 0.27
ATP1B3P54709 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
ATP1B3P54709 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
ATP1B3P54709 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP1B3P54709 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC16.76■□□□□ 0.27
ATP1B3P54709 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.76■□□□□ 0.27
ATP1B3P54709 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
ATP1B3P54709 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.76■□□□□ 0.27
ATP1B3P54709 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.75■□□□□ 0.27
ATP1B3P54709 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 AC092118.2-201ENST00000613495 667 ntBASIC16.75■□□□□ 0.27
ATP1B3P54709 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 TFP1-202ENST00000475455 1573 ntBASIC16.75■□□□□ 0.27
ATP1B3P54709 AL032819.2-201ENST00000624543 2162 ntBASIC16.75■□□□□ 0.27
ATP1B3P54709 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
ATP1B3P54709 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
ATP1B3P54709 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP1B3P54709 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP1B3P54709 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
ATP1B3P54709 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
ATP1B3P54709 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC16.74■□□□□ 0.27
ATP1B3P54709 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
ATP1B3P54709 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC16.74■□□□□ 0.27
ATP1B3P54709 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP1B3P54709 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.74■□□□□ 0.27
ATP1B3P54709 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP1B3P54709 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
ATP1B3P54709 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC16.74■□□□□ 0.27
ATP1B3P54709 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC16.74■□□□□ 0.27
ATP1B3P54709 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms