Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.84■□□□□ 0.77
ITGA8P53708 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ITGA8P53708 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ITGA8P53708 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
ITGA8P53708 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.84■□□□□ 0.77
ITGA8P53708 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
ITGA8P53708 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.83■□□□□ 0.77
ITGA8P53708 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 SDHAP1-207ENST00000440850 2000 ntBASIC19.83■□□□□ 0.77
ITGA8P53708 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
ITGA8P53708 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.83■□□□□ 0.77
ITGA8P53708 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ITGA8P53708 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ITGA8P53708 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.83■□□□□ 0.77
ITGA8P53708 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
ITGA8P53708 AC133552.2-202ENST00000575694 574 ntBASIC19.83■□□□□ 0.77
ITGA8P53708 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC19.83■□□□□ 0.77
ITGA8P53708 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGA8P53708 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGA8P53708 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC19.83■□□□□ 0.76
ITGA8P53708 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITGA8P53708 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.83■□□□□ 0.76
ITGA8P53708 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC19.83■□□□□ 0.76
ITGA8P53708 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
ITGA8P53708 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITGA8P53708 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
ITGA8P53708 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
ITGA8P53708 FP475955.4-201ENST00000623131 1990 ntBASIC19.83■□□□□ 0.76
ITGA8P53708 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
ITGA8P53708 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.82■□□□□ 0.76
ITGA8P53708 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
ITGA8P53708 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.82■□□□□ 0.76
ITGA8P53708 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA8P53708 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC19.82■□□□□ 0.76
ITGA8P53708 AL390719.1-204ENST00000412397 1219 ntBASIC19.82■□□□□ 0.76
ITGA8P53708 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA8P53708 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA8P53708 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC19.82■□□□□ 0.76
ITGA8P53708 PHB2-213ENST00000546111 858 ntTSL 2 BASIC19.82■□□□□ 0.76
ITGA8P53708 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 AC104417.2-201ENST00000562989 1793 ntBASIC19.82■□□□□ 0.76
ITGA8P53708 AC020763.4-201ENST00000623414 4170 ntBASIC19.82■□□□□ 0.76
ITGA8P53708 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
ITGA8P53708 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 AL031598.1-201ENST00000561511 1773 ntBASIC19.81■□□□□ 0.76
ITGA8P53708 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA8P53708 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA8P53708 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.81■□□□□ 0.76
ITGA8P53708 AC005829.2-201ENST00000571422 1056 ntBASIC19.81■□□□□ 0.76
ITGA8P53708 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
ITGA8P53708 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
ITGA8P53708 MKRN4P-201ENST00000444706 1521 ntBASIC19.81■□□□□ 0.76
ITGA8P53708 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA8P53708 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
ITGA8P53708 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.81■□□□□ 0.76
ITGA8P53708 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC19.8■□□□□ 0.76
ITGA8P53708 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
ITGA8P53708 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.8■□□□□ 0.76
ITGA8P53708 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms