Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK7P50613 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK7P50613 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC21.41■■□□□ 1.02
CDK7P50613 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
CDK7P50613 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC21.4■■□□□ 1.02
CDK7P50613 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDK7P50613 AC073130.3-201ENST00000624389 2278 ntBASIC21.4■■□□□ 1.02
CDK7P50613 FXN-203ENST00000396366 922 ntTSL 2 BASIC21.4■■□□□ 1.02
CDK7P50613 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC21.4■■□□□ 1.02
CDK7P50613 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDK7P50613 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDK7P50613 AC083849.1-201ENST00000615227 514 ntBASIC21.4■■□□□ 1.02
CDK7P50613 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.4■■□□□ 1.02
CDK7P50613 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
CDK7P50613 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
CDK7P50613 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC21.4■■□□□ 1.02
CDK7P50613 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
CDK7P50613 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDK7P50613 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDK7P50613 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC21.39■■□□□ 1.02
CDK7P50613 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.39■■□□□ 1.02
CDK7P50613 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC21.39■■□□□ 1.02
CDK7P50613 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.02
CDK7P50613 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC21.39■■□□□ 1.01
CDK7P50613 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.39■■□□□ 1.01
CDK7P50613 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.39■■□□□ 1.01
CDK7P50613 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC21.39■■□□□ 1.01
CDK7P50613 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC21.39■■□□□ 1.01
CDK7P50613 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC21.39■■□□□ 1.01
CDK7P50613 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.39■■□□□ 1.01
CDK7P50613 AC112907.2-201ENST00000448639 330 ntBASIC21.39■■□□□ 1.01
CDK7P50613 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 ZNF444P1-201ENST00000559497 298 ntBASIC21.39■■□□□ 1.01
CDK7P50613 NT5C-210ENST00000582160 860 ntTSL 2 BASIC21.39■■□□□ 1.01
CDK7P50613 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC21.39■■□□□ 1.01
CDK7P50613 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
CDK7P50613 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
CDK7P50613 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC21.39■■□□□ 1.01
CDK7P50613 SMG8-203ENST00000578922 2178 ntBASIC21.38■■□□□ 1.01
CDK7P50613 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK7P50613 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK7P50613 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
CDK7P50613 LINC01465-201ENST00000408887 1940 ntBASIC21.38■■□□□ 1.01
CDK7P50613 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC21.38■■□□□ 1.01
CDK7P50613 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK7P50613 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK7P50613 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
CDK7P50613 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK7P50613 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.38■■□□□ 1.01
CDK7P50613 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.38■■□□□ 1.01
CDK7P50613 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
CDK7P50613 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.37■■□□□ 1.01
CDK7P50613 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 STARP1-201ENST00000397973 869 ntBASIC21.37■■□□□ 1.01
CDK7P50613 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK7P50613 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK7P50613 NEK4P2-201ENST00000580004 1012 ntBASIC21.37■■□□□ 1.01
CDK7P50613 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC21.37■■□□□ 1.01
CDK7P50613 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC21.37■■□□□ 1.01
CDK7P50613 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
CDK7P50613 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC21.37■■□□□ 1.01
CDK7P50613 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC21.37■■□□□ 1.01
CDK7P50613 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDK7P50613 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
CDK7P50613 BX119927.1-201ENST00000636596 1552 ntBASIC21.36■■□□□ 1.01
CDK7P50613 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.36■■□□□ 1.01
CDK7P50613 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC21.36■■□□□ 1.01
CDK7P50613 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
CDK7P50613 AC092667.1-201ENST00000434301 2586 ntBASIC21.36■■□□□ 1.01
CDK7P50613 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 AP000523.1-201ENST00000398242 1049 ntBASIC21.36■■□□□ 1.01
CDK7P50613 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC21.36■■□□□ 1.01
CDK7P50613 ATP5G2P1-201ENST00000433580 426 ntBASIC21.36■■□□□ 1.01
CDK7P50613 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC21.36■■□□□ 1.01
CDK7P50613 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC21.36■■□□□ 1.01
CDK7P50613 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.36■■□□□ 1.01
CDK7P50613 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC21.36■■□□□ 1.01
CDK7P50613 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
CDK7P50613 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC21.36■■□□□ 1.01
CDK7P50613 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC21.36■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms