Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.69■□□□□ 0.58
SLC6A12P48065 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A12P48065 AC110285.5-201ENST00000611501 352 ntBASIC18.69■□□□□ 0.58
SLC6A12P48065 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
SLC6A12P48065 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
SLC6A12P48065 AL161938.1-201ENST00000569833 2180 ntBASIC18.69■□□□□ 0.58
SLC6A12P48065 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC18.69■□□□□ 0.58
SLC6A12P48065 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SLC6A12P48065 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.69■□□□□ 0.58
SLC6A12P48065 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A12P48065 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.68■□□□□ 0.58
SLC6A12P48065 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
SLC6A12P48065 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC18.68■□□□□ 0.58
SLC6A12P48065 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC18.68■□□□□ 0.58
SLC6A12P48065 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SLC6A12P48065 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC18.68■□□□□ 0.58
SLC6A12P48065 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
SLC6A12P48065 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
SLC6A12P48065 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 AL160286.2-201ENST00000567150 934 ntBASIC18.67■□□□□ 0.58
SLC6A12P48065 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 MMD2-204ENST00000612910 778 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC6A12P48065 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.67■□□□□ 0.58
SLC6A12P48065 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.67■□□□□ 0.58
SLC6A12P48065 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SLC6A12P48065 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC6A12P48065 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
SLC6A12P48065 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC18.66■□□□□ 0.58
SLC6A12P48065 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC6A12P48065 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
SLC6A12P48065 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC18.66■□□□□ 0.58
SLC6A12P48065 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
SLC6A12P48065 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC6A12P48065 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.66■□□□□ 0.58
SLC6A12P48065 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.66■□□□□ 0.58
SLC6A12P48065 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
SLC6A12P48065 TNXA-203ENST00000507684 2038 ntBASIC18.66■□□□□ 0.58
SLC6A12P48065 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SLC6A12P48065 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.65■□□□□ 0.58
SLC6A12P48065 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.65■□□□□ 0.58
SLC6A12P48065 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.65■□□□□ 0.58
SLC6A12P48065 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC6A12P48065 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SLC6A12P48065 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
SLC6A12P48065 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC18.65■□□□□ 0.58
SLC6A12P48065 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SLC6A12P48065 C1QBPP2-201ENST00000528754 825 ntBASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms