Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.53■□□□□ 0.88
SSR1P43307 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC20.53■□□□□ 0.88
SSR1P43307 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
SSR1P43307 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC20.53■□□□□ 0.88
SSR1P43307 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SSR1P43307 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SSR1P43307 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.52■□□□□ 0.88
SSR1P43307 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC20.52■□□□□ 0.88
SSR1P43307 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.52■□□□□ 0.88
SSR1P43307 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 TFP1-202ENST00000475455 1573 ntBASIC20.52■□□□□ 0.88
SSR1P43307 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.52■□□□□ 0.88
SSR1P43307 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.52■□□□□ 0.88
SSR1P43307 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC20.52■□□□□ 0.88
SSR1P43307 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.52■□□□□ 0.88
SSR1P43307 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SSR1P43307 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.87
SSR1P43307 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.87
SSR1P43307 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.52■□□□□ 0.87
SSR1P43307 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC20.52■□□□□ 0.87
SSR1P43307 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.87
SSR1P43307 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SSR1P43307 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR1P43307 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR1P43307 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SSR1P43307 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC20.51■□□□□ 0.87
SSR1P43307 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
SSR1P43307 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.51■□□□□ 0.87
SSR1P43307 AC073210.2-201ENST00000430369 194 ntBASIC20.51■□□□□ 0.87
SSR1P43307 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.51■□□□□ 0.87
SSR1P43307 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.51■□□□□ 0.87
SSR1P43307 MYC-209ENST00000641252 345 ntBASIC20.51■□□□□ 0.87
SSR1P43307 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
SSR1P43307 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SSR1P43307 AL032819.2-201ENST00000624543 2162 ntBASIC20.51■□□□□ 0.87
SSR1P43307 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SSR1P43307 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR1P43307 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR1P43307 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR1P43307 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.5■□□□□ 0.87
SSR1P43307 PNMA6B-201ENST00000538162 1200 ntBASIC20.5■□□□□ 0.87
SSR1P43307 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.5■□□□□ 0.87
SSR1P43307 HLA-B-256ENST00000639848 1089 ntBASIC20.5■□□□□ 0.87
SSR1P43307 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 AC018445.3-201ENST00000624177 1945 ntBASIC20.5■□□□□ 0.87
SSR1P43307 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
SSR1P43307 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
SSR1P43307 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
SSR1P43307 Z82202.1-201ENST00000623446 1880 ntBASIC20.5■□□□□ 0.87
SSR1P43307 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
SSR1P43307 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms