Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC14.23□□□□□ -0.13
CKS2P33552 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
CKS2P33552 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CKS2P33552 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CKS2P33552 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC14.22□□□□□ -0.13
CKS2P33552 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS2P33552 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CKS2P33552 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CKS2P33552 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC14.22□□□□□ -0.13
CKS2P33552 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC14.22□□□□□ -0.13
CKS2P33552 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
CKS2P33552 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CKS2P33552 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 GUSBP5-201ENST00000418136 578 ntBASIC14.22□□□□□ -0.13
CKS2P33552 AC091799.1-201ENST00000422823 811 ntBASIC14.22□□□□□ -0.13
CKS2P33552 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS2P33552 AL356652.1-201ENST00000615962 565 ntBASIC14.22□□□□□ -0.13
CKS2P33552 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CKS2P33552 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC14.22□□□□□ -0.13
CKS2P33552 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.21□□□□□ -0.13
CKS2P33552 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 AC099791.1-201ENST00000416440 715 ntBASIC14.21□□□□□ -0.13
CKS2P33552 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 AC010141.2-201ENST00000452426 721 ntBASIC14.21□□□□□ -0.13
CKS2P33552 CDV3P1-201ENST00000471403 739 ntBASIC14.21□□□□□ -0.13
CKS2P33552 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC14.21□□□□□ -0.13
CKS2P33552 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC14.21□□□□□ -0.13
CKS2P33552 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CKS2P33552 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CKS2P33552 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC14.21□□□□□ -0.13
CKS2P33552 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms